Codon Stabilization Coefficients — df_csc • codonopt

Table of codon stabilization coefficients (CSCs) as reported by https://doi.org/10.7554/eLife.45396.

Usage

df_csc

Format

A data frame.

codon: Codons (DNA triplets)
aa_code: Amino acid 3-letter codes
X293T_endo: CSC for X293T cells
HeLa_endo: CSC for HeLa cells
RPE_endo: CSC for RPE cells
X293T_ORFome: CSC for X293T cells
K562_ORFome: CSC for K562 cells
K562_SLAM: CSC for K562 cells
genome: Codon counts in genome
transcriptome: Codon counts weighted by gene RPKM

Source

https://doi.org/10.7554/eLife.45396.006